First-principles calculations

Phonons in δ-AlOOH

Raman and infrared spectra of δ-AlOOH show anomalies from hydrogen-bond disorder at much lower pressures than static harmonic theory predicts. Deep-potential molecular dynamics and phonon quasiparticle analysis at 300 K explain them as finite-temperature dynamics of the disordering hydrogen bonds.

  • My contribution: the harmonic SCAN-DFT phonon benchmark that validates the deep potential and supplies the phonon eigenvectors

  • Automated across pressures as a Snakemake workflow running VASP and Phonopy (SCAN, PAW, 520 eV, 2×2×4 supercells)

  • Paper: arXiv:2606.14590

Harmonic phonon dispersion and vibrational density of states of delta-AlOOH from SCAN-DFT and SCAN-DP

Harmonic phonon dispersion and vibrational density of states (VDoS) for δ-AlOOH from SCAN-DFT and SCAN-DP at (a) 0 GPa and (b) 90 GPa.

Monte Carlo geometry optimization of clusters

As an undergraduate at The Cooper Union with Prof. Robert Q. Topper, I worked on finding the lowest-energy structures of atomic and molecular clusters with simulated annealing Monte Carlo.

  • TransRot optimizes cluster geometries through purely translational and rotational moves

  • Mag-walking helps molecules reorient and escape high-energy local minima; sawtooth annealing samples both molten and crystalline structures

  • Code: TransRot · Paper: ACS Symposium Series

Co-authored publications

  • Lattice dynamics and the spectroscopic signatures of H-bond disorder in δ-AlOOH. C. Luo, S. Lee, H. Wang, Z. Zhang, R. Wentzcovitch, arXiv:2606.14590 (2026).

  • TransRot: a portable software package for simulated annealing Monte Carlo geometry optimization of atomic and molecular clusters. R. Q. Topper, S. L. Topper, S. Lee, ACS Symposium Series 1428 (2022).