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Learning
Learning

Stanford

  • 4D-STEM
    • Phase contrast physics
    • Phase retrieval methods
    • Diffraction peak detection
    • Strain measurement and analysis
    • Orientation mapping
    • Phase contrast transfer function
    • SSB (direct ptychogrpahy)
    • Precession electron diffraction
    • Joint ptychographic tomography
    • Ronchigram
    • References
    • In-situ 4D-STEM

Physics & math

  • Calculus
  • Classical Mechanics
  • Fourier
  • Linear algebra
  • Statistics
  • Thermodynamics
  • Crystallography
  • Pair distribution function

Algorithms

  • Deep Learning
  • Image processing
  • Data structures

Tools

  • C++
  • GPU Wiki
  • GPU optimization
  • CUDA fundamentals
  • CUDA tutorials
  • WebGPU
  • Python
  • NumPy
  • Image
  • JavaScript
  • VIM
  • Bash
  • Development workflows

Thoughts

  • Essays
  • Actions

Reference

  • Bob’s notes
  • TEM/STEM Training
  • Links
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Links¶

Bookmarks I use often.

NVIDIA Holoscan
  • Holohub

  • Holoscan SDK

  • Accelerating ptychography workflows with NVIDIA Holoscan at Diamond Light Source

  • Sensor processing on GPU

Journals
  • NVIDIA publication

  • Google publication

  • Nature

  • Nature materials

  • Nature methods

  • Science

  • arXiv - Image and Video Processing

Blog links
  • Anthropic

  • Read the Docs Blog

  • Python Blog

  • TechCrunch

  • Google Developer Blog

  • NVIDIA News

  • NVIDIA Developer Blog

  • RAPIDS AI Blog

  • CertLibrary Blog

  • Hacker News

  • GitHub Blog

  • VS Code Updates

  • VS Code Blog

  • OpenACC

Shortcut links
  • GitHub shortcuts

  • Outlook shortcuts

  • Slack

  • Brave

  • macOS

  • Spotlight

  • Visual Studio Code

  • Visual Studio Code Copilot

  • Warp

API links
  • React API

  • NumPy

  • SciPy

  • Matplotlib

  • CuPy

  • PyTorch

  • TensorFlow

  • JAX

  • scikit-learn

  • pandas

  • WebGPU

  • CUDA programming

Video links
  • Gatan: real-time in-situ insights: Dynamic mapping with 4D STEM

  • Gatan: 4D STEM orientation mapping in DigitalMicrograph with STEMx OIM

  • IPAM: Colin Ophus - Multi-dimensional scanning transmission electron microscopy to solve 3D nanostructures

  • Colin Ophus: New Dimensions in Scanning Transmission Electron Microscopy

  • Peng Wang - Electron Ptychography: Emerging Computational Microscopy for Physical/Biological Science

Web links
  • Gatan: Orientation Mapping

  • JEOL-IDES

  • Copilot instructions

  • Build agent

Government & Research links
  • NSF News

  • DOE News

VS Code shortcuts
  • cmd-U: Undo last action

  • cmd-L, shift-opt-down/up: Select and duplicate current line

  • cmd-L, cmd-shift-L: Select all occurrences of selection

  • cmd-fn2: Select all matched words

  • cmd-fn3 or cmd-shift-fn3: Select one by one

  • cmd-.: Quick fix

  • cmd-opt-[, cmd-opt-]: Fold/unfold region

  • cmd-K cmd-0, cmd-K cmd-J: Fold/unfold all

  • cmd-shift-\: Jump to matching bracket

  • cmd-shift-[, cmd-shift-]: Switch between editor tabs

  • opt-cmd-.: Choose models

  • ctrl-l: Center view (requires “Center Editor Window” extension)

macOS/daily shortcuts
  • FN-Q Quick note

  • F-11 show desktop

  • opt-F2/3/10/ for brightness, search, sound settings

  • fn-F12 in Browser to show logs

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